@pipeworx/mcp-biomodels

BioModels — the public repository of curated, executable mathematical models of biological systems (SBML, CellML, BioPAX and more), searchable by pathway, disease, organism, gene or author, with the model files themselves and the paper each model came fro

Installation

MCP client config (paste into mcp.json)

{
  "mcpServers": {
    "npm-pipeworx-mcp-biomodels": {
      "command": "npx",
      "args": [
        "@pipeworx/mcp-biomodels"
      ]
    }
  }
}

Agent install prompt

Copy and paste into Cursor / Claude / other agents to install this MCP for you

Please read this MCP repository and install it into my current environment:
https://www.npmjs.com/package/@pipeworx/mcp-biomodels

Known working client config (can write into mcp.json):
{
  "mcpServers": {
    "npm-pipeworx-mcp-biomodels": {
      "command": "npx",
      "args": [
        "@pipeworx/mcp-biomodels"
      ]
    }
  }
}

Please: 1) check README for deps and env vars; 2) write config for my client; 3) if secrets are missing, tell me what to fill — do not invent values.

GitHub

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